miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|52174056|gb|BP258826.1|BP258826 AGAGCTTGTCGCTGCGGTGTTGCTGTTGGAGACTCGATTGTTGGTGACAGCGAAAGAACGATAACAAAATGCCGGAGCGA
GATAGTGAGCCGTTCTCCAACCCTTTGGCCCCCGATGGCCACGATGTGGATGATCCTCACTCCTTCCACCAATCAAAACT
CACCAATGAAGACTTGAGGAAACTTCTCATGACCCCCAGGGCTGCACCTACCTCTGCACCACCTTCTAAGTCACGTCACC
ATGAGATGCCAAGGGAGTACAATGAGGATGAAGACCCAGCTGCACGAAGGAGGAAAAAGAAAAGTTATTATGCCAAGCTA
CGCCAACAAGAAATTGAGAGAGAGAGAGAGCTAGCAGAGAAGTACCGGGATCGTGCCAAGGAACGGAGAGATGCAGTGAA
CAAAGATTATGAAGAAACCTAGCTTATCAGCACCACAGCTCACTATAGGGCTGTTGGCCCCACTGCTGCCGCCGCCACTT
TCATTCTCATCCATTTTTCACAGTTTATTCACCTGCCCTTCTTCCTCCTCTGTCTCCTTCTTTATCACTACCCCCTCACC
CCCTCGCT




Most similar to sp|Q66HG8|RED_RAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
          Length = 557

 Score =  171 bits (432), Expect = 4e-42
 Identities = 88/135 (65%), Positives = 89/135 (65%)
 Frame = +3

Query: 69  MPERDSEPFSNPLAPDGHDVDDPHSFHQSKLTNEDLRKLLMXXXXXXXXXXXXXXXHHEM 248
           MPERDSEPFSNPLAPDGHDVDDPHSFHQSKLTNED RKLLM               HHEM
Sbjct: 1   MPERDSEPFSNPLAPDGHDVDDPHSFHQSKLTNEDFRKLLMTPRAAPTSAPPSKSRHHEM 60

Query: 249 PREYNEDEDPXXXXXXXXXXXXXXXXXXXXXXXXXXXKYRDRAKERRDAVNKDYEET*LI 428
           PREYNEDEDP                           KYRDRAKERRD VNKDYEET LI
Sbjct: 61  PREYNEDEDPAARRRKKKSYYAKLRQQEIERERELAEKYRDRAKERRDGVNKDYEETELI 120

Query: 429 STTAHYRAVGPTAAA 473
           STTA+YRAVGPTA A
Sbjct: 121 STTANYRAVGPTAEA 135